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Logo for CIL

CIL

Provides modular optimisation framework for prototyping reconstruction methods. Tools for loading, preprocessing, visualising tomographic data. Supports Jupyter Notebooks via Docker.

  • Imaging and Image Processing
  • (Batchfile)
  • (C)
  • (C++)
  • + 4
0
0

med-imagetools

Aims to provide transparent and reproducible medical image processing pipelines in Python. Focuses on subject-based machine learning and processing DICOMs into deep learning-ready format.

  • Imaging and Image Processing
  • (Dockerfile)
  • ("Jupyter Notebook")
  • (Python)
0
0
Logo for MIPAV

MIPAV

Enables quantitative analysis and visualization of medical images. Cross-platform (Java). Aims to develop computational methods for biomedical data.

  • Imaging and Image Processing
    0
    0
    Logo for MITK

    MITK

    Combines ITK and VTK with an application framework. Aims to reduce effort for interactive medical image analysis applications. Supports Windows, Linux, macOS.

    • Imaging and Image Processing
    • (Batchfile)
    • (C)
    • (C++)
    • + 8
    0
    0
    Logo for mri_distortion_toolkit

    mri_distortion_toolkit

    A toolkit to correct geometric distortion in MR images. Includes tools for converting DICOM to NIfTI, and generating distortion correction maps.

    • Imaging and Image Processing
    • (Batchfile)
    • (CSS)
    • (HTML)
    • + 3
    0
    0

    mudicom

    A Python library for interacting with DICOM files. Provides a simpler, more intuitive interface than other libraries. Archived by the owner on Jul 31, 2023.

    • Imaging and Image Processing
    • (Python)
    0
    0
    Logo for OnkoDICOM

    OnkoDICOM

    Cross-platform. Provides DVH output, clinical data capture (radiomics), Pyradiomics output, anonymization, ROI manipulation. Inspired by dicompyler.

    • Imaging and Image Processing
    • (Python)
    0
    0
    Logo for OsiriX

    OsiriX

    Widely used DICOM viewer. Supports 2D, 3D, 4D, 5D viewing. Plugin architecture. Commercial version "OsiriX MD" is FDA/CE certified. Open-source version has limited functionality. OSAIRIS is a cloud-based AI tool for automatic segmentation of radiotherapy images.

    • Imaging and Image Processing
    • (ActionScript)
    • (AppleScript)
    • (C)
    • + 12
    0
    0
    Logo for Plastimatch

    Plastimatch

    Focuses on high-performance volumetric registration, segmentation, and image processing of volumetric medical images. Supports DICOM and DICOM-RT import/export.

    • Imaging and Image Processing
    • (C)
    • (C++)
    • (CMake)
    • + 2
    0
    0

    PlatiPy

    Aims to simplify use, visualization, processing, and analysis of medical images. Built on SimpleITK, VTK. Jupyter notebooks provided.

    • Imaging and Image Processing
    • (CSS)
    • (Dockerfile)
    • (HTML)
    • + 4
    0
    0
    Logo for Pydicer

    Pydicer

    Eases conversion of Radiotherapy DICOM data to research-ready format (NIfTI). Provides analysis functionality. Uses SimpleITK and PlatiPy. Still a research tool, users should inspect outputs.

    • Imaging and Image Processing
    • (Makefile)
    • (Python)
    • (Shell)
    0
    0
    Logo for Pylinac

    Pylinac

    Pylinac provides TG-142 quality assurance (QA) tools to Python programmers in the field of therapy and diagnostic medical physics.

    • Imaging and Image Processing
    • (Python)
    • (Shell)
    0
    0